class Wgsim::ReferenceSequence

• Wgsim::ReferenceSequence
• Reference
• Object

Overview

A mutable-style view of a reference sequence after mutation simulation.

The simulator first records each reference position as a ReferenceBase. This class then flattens those records into the final FASTA sequence.

Defined in:

wgsim/reference_sequence.cr

Constant Summary

DEFAULT_FASTA_LINE_WIDTH = 80

Constructors

• .new(reference_bases : Slice(ReferenceBase))

Macro Summary

• method_missing(call)

Instance Method Summary

• #to_slice : Bytes

Constructor Detail

Macro Detail

Instance Method Detail